infovis.tree.io
Class NewickParser

java.lang.Object
  antlr.Parser
      antlr.LLkParser
          infovis.tree.io.NewickParser

All Implemented Interfaces:

NewickTokenTypes

public class NewickParser
extends antlr.LLkParser
implements NewickTokenTypes

Parser for the Newick Tree format.

Author:

Jean-Daniel Fekete

Field Summary

static String[]	_tokenNames
static antlr.collections.impl.BitSet	_tokenSet_0
static antlr.collections.impl.BitSet	_tokenSet_1
static antlr.collections.impl.BitSet	_tokenSet_2
static antlr.collections.impl.BitSet	_tokenSet_3
static antlr.collections.impl.BitSet	_tokenSet_4

Fields inherited from interface infovis.tree.io.NewickTokenTypes

COLON, COMMA, EOF, ESC, LABEL, LPAREN, NULL_TREE_LOOKAHEAD, NUMBER, RPAREN, SEMI, WS

Constructor Summary

NewickParser(antlr.ParserSharedInputState state)

NewickParser(antlr.TokenBuffer tokenBuf)

NewickParser(antlr.TokenStream lexer)

Method Summary

String	branch_length()
void	descendant_list()
String	label()
void	subtree()
void	tree()

Methods inherited from class antlr.LLkParser

consume, LA, LT, traceIn, traceOut

Methods inherited from class antlr.Parser

addMessageListener, addParserListener, addParserMatchListener, addParserTokenListener, addSemanticPredicateListener, addSyntacticPredicateListener, addTraceListener, consumeUntil, consumeUntil, getAST, getASTFactory, getFilename, getInputState, getTokenName, getTokenNames, getTokenTypeToASTClassMap, isDebugMode, mark, match, match, matchNot, panic, recover, removeMessageListener, removeParserListener, removeParserMatchListener, removeParserTokenListener, removeSemanticPredicateListener, removeSyntacticPredicateListener, removeTraceListener, reportError, reportError, reportWarning, rewind, setASTFactory, setASTNodeClass, setASTNodeType, setDebugMode, setFilename, setIgnoreInvalidDebugCalls, setInputState, setTokenBuffer, traceIndent

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

_tokenNames

public static final String[] _tokenNames

_tokenSet_0

public static final antlr.collections.impl.BitSet _tokenSet_0

_tokenSet_1

public static final antlr.collections.impl.BitSet _tokenSet_1

_tokenSet_2

public static final antlr.collections.impl.BitSet _tokenSet_2

_tokenSet_3

public static final antlr.collections.impl.BitSet _tokenSet_3

_tokenSet_4

public static final antlr.collections.impl.BitSet _tokenSet_4

Constructor Detail

NewickParser

public NewickParser(antlr.TokenBuffer tokenBuf)

NewickParser

public NewickParser(antlr.TokenStream lexer)

NewickParser

public NewickParser(antlr.ParserSharedInputState state)

Method Detail

tree

public final void tree()
                throws antlr.RecognitionException,
                       antlr.TokenStreamException

Throws:

antlr.RecognitionException

antlr.TokenStreamException

descendant_list

public final void descendant_list()
                           throws antlr.RecognitionException,
                                  antlr.TokenStreamException

Throws:

antlr.RecognitionException

antlr.TokenStreamException

label

public final String label()
                   throws antlr.RecognitionException,
                          antlr.TokenStreamException

Throws:

antlr.RecognitionException

antlr.TokenStreamException

branch_length

public final String branch_length()
                           throws antlr.RecognitionException,
                                  antlr.TokenStreamException

Throws:

antlr.RecognitionException

antlr.TokenStreamException

subtree

public final void subtree()
                   throws antlr.RecognitionException,
                          antlr.TokenStreamException

Throws:

antlr.RecognitionException

antlr.TokenStreamException